Flipkart sometimes raises consolidated bills for shipping & commission services etc. In the bill they bifurcates the income heads & provided the value on which TDS to be deducted. I have cross check with other. Generally for different services, separate bills are raised. However in income tax/service tax there is no restriction on single bills. Now we need to deduct TDS under 2 different heads on single bill.
In system we find the only option to enter manually same invoice twice & then calculate the TDS.